Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835254.1_cds_XP_016505887.1_19175
CDS Infomation

[gene=LOC107823710] [db_xref=GeneID:107823710] [protein=glucan endo-1,3-beta-glucosidase 12-like] [protein_id=XP_016505887.1] [location=complement(join(61838..61872,62981..64297,64385..64448))] [gbkey=CDS]
Sequence

ATGGAAAAACTCACCATTTGTCTTCTCCTCTTACTCTTTTCCCTTTCCTTTTTCTCCATT
GCAGATGGTGGATCAATCGGAGTGAACTATGGGCGTGTAGCTAACAACTTACCATCAGCA
GTAAAAGCTGTAGCCCTGCTGAAATCTCAAGGCGTAGAACGTGTTAAAGTTTATGATACT
GACCCGGCTGTACTCAAAGCACTTTCCGGGTCGGGTATTAAGGTTACCGTTAACCTACCC
AACGAGCTCCTTTACAATGCAGCTAAACGCCAGTCATTTGCTTACTCTTGGGTCCAGCGT
AATGTTGCTGCTTACTACCCTTCTACTCAAATCGAATCCATTGCCGTTGGAAATGAAGTT
TTCGTTGACCCGCATAATACGACCCGTTTTCTTGTACCCGCTATGAAGAATATTCATGAG
GCTCTTTTGAAGTACAATTTCCATGACAAAATCAAAGTCTCTTCTCCTGTTGCTCTCAGT
GCATTGCAGAACTCTTACCCGTCTTCAGCTGGGTCGTTTAGATCCGAATTGATCGAACCC
GTAATTAAACCCATGATGGATTTTCTCCGCCAAACTGGATCCTATTTAATGGTTAACTGT
TACCCGTTTTTTGCATATGAGTCAAACTCCGACGTCATTTCACTTGACTACGCTTTGTTC
CGTGAAAATCCCGGTGTCGTTGACGCCGGTAATGGACTCCGTTACTTCAGCCTCTTTGAC
GCTCAAGTTGACGCCGTATTCGCTGCATTGTCAGCTTTGAAGTACGATGATATCAAAATG
GTCGTAACGGAAACTGGCTGGCCGTCTAAAGGAGACGACATTGAAGTCGGTGCCAGCGTG
GATAACGCCGCCGCATACAATGGCAACCTTGTCCGGCGAATCCTCACTGGTGGTGGGACC
CCTTTAAGGCCGAAAGAAGACATCACAGTCTTCCTCTTCGCACTTTTCAACGAGAACAAA
AAGCCGGGTCCCACATCAGAGCGAAATTTCGGGTTATTCTACCCGAATGAGCGAAAGGTT
TACGATATACCGTTAAATATGGAGGGACTGAAACATTATATTGACCGGCAGTCACCGGTT
GCCGGCGGCGAGAGAATGCAGAAAGGCGGGAAGGGGAATGTGTCGCCGAGTGTGCCTGGG
CAAACGTGGTGCGTGGCGAGTGGTGAAGCGGGGAAGGATAATCTACAAGCAGCTCTAGAT
TTCGCTTGTGGTGAGGGCGGAGCTGATTGCCGTTCGATTCAGCCAGGGTCCACGTGTTAC
AATCCTAACACGCTGGAAGCTCATGCATCATATGCTTTCAATAGTTATTATCAGAAGAAA
GGGCGTGCGATGGGTTCGTGTTATTTCGGTGGGGCCGCGTACATTGTTCATCAACAACCT
AAATATGGAAACTGTGAATTACCCACTGAAGATTGA

Peptide Sequence

PEP ID

XP_016505887.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Nicotiana tabacum]
Sequence

MEKLTICLLLLLFSLSFFSIADGGSIGVNYGRVANNLPSAVKAVALLKSQGVERVKVYDT
DPAVLKALSGSGIKVTVNLPNELLYNAAKRQSFAYSWVQRNVAAYYPSTQIESIAVGNEV
FVDPHNTTRFLVPAMKNIHEALLKYNFHDKIKVSSPVALSALQNSYPSSAGSFRSELIEP
VIKPMMDFLRQTGSYLMVNCYPFFAYESNSDVISLDYALFRENPGVVDAGNGLRYFSLFD
AQVDAVFAALSALKYDDIKMVVTETGWPSKGDDIEVGASVDNAAAYNGNLVRRILTGGGT
PLRPKEDITVFLFALFNENKKPGPTSERNFGLFYPNERKVYDIPLNMEGLKHYIDRQSPV
AGGERMQKGGKGNVSPSVPGQTWCVASGEAGKDNLQAALDFACGEGGADCRSIQPGSTCY
NPNTLEAHASYAFNSYYQKKGRAMGSCYFGGAAYIVHQQPKYGNCELPTED

Transcript Sequence

Gene sequence data has not been registered.